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Repository revision

Revision: 3:79a4a86981d3

Repository 'ffp_phylogeny'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/damion/ffp_phylogeny

Feature Frequency Profile Phylogeny tool metadata

Miscellaneous

Name: Feature Frequency Profile Phylogeny

Description: An alignment free comparison tool for phylogenetic analysis and text comparison

Id: ffp_phylogeny

Guid: toolshed.g2.bx.psu.edu/repos/damion/ffp_phylogeny/ffp_phylogeny/0.1.04

Version: 0.1.04

Version command string: python /srv/toolshed/main/var/data/repos/001/repo_1420/ffp_phylogeny.py --version

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/damion/ffp_phylogeny/ffp_phylogeny/0.1.04 (this tool)

toolshed.g2.bx.psu.edu/repos/damion/ffp_phylogeny/ffp_phylogeny/0.1.03

toolshed.g2.bx.psu.edu/repos/damion/ffp_phylogeny/ffp_phylogeny/0.1.02

toolshed.g2.bx.psu.edu/repos/damion/ffp_phylogeny/ffp_phylogeny/0.1.00

ffp_phylogeny

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

ffp-phylogeny

0.3.19_d4382db015acec0e5cc43d6c1ac80ae12cb7e6b3

package

Functional tests

name

inputs

outputs

required files

Test-1

sequence|file_type: nucleotide
length: 1
sequence|groupings: false
tree: 0
sequence|filesin: ['genome1', 'genome2']

info: test_length_1_output.tabular

genome1
genome2
test_length_1_output.tabular

Test-2

sequence|file_type: nucleotide
length: 2
sequence|groupings: false
tree: 0
sequence|filesin: ['genome1', 'genome2']

info: test_length_2_output.tabular

genome1
genome2
test_length_2_output.tabular

Test-3

sequence|file_type: nucleotide-multi
length: 2
sequence|groupings: true
tree: 0
sequence|filesin: ['genome1', 'genome2']

info: test_length_2b_output.tabular

genome1
genome2
test_length_2b_output.tabular