Repository revision
4:8e2ac1b8f70a

Repository 'picrust_compare_biom'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/picrust_compare_biom

Compare BIOM tables tool metadata
Miscellaneous
Compare the accuracy of biom files (expected and observed) either by observations (default) or by samples.
picrust_compare_biom
toolshed.g2.bx.psu.edu/repos/iuc/picrust_compare_biom/picrust_compare_biom/1.1.1.1
1.1.1.1
predict_metagenomes.py --version | cut -d" " -f3
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/picrust_compare_biom/picrust_compare_biom/1.1.1.1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/picrust_compare_biom/picrust_compare_biom/1.1.1.0
picrust_compare_biom
Requirements (dependencies defined in the <requirements> tag set)
name version type
picrust 1.1.1 package
Functional tests
name inputs outputs required files
Test-1 observed: observed_ra.biom
expected: expected_ra.biom
name: value
observed_ra.biom
expected_ra.biom
value
Test-2 observed: observed.biom
expected: expected.biom
not_relative_abundance_scores: True
name: value
observed.biom
expected.biom
value
Test-3 observed: observed.biom
expected: expected.biom
not_relative_abundance_scores: True
advanced|compare_observations: True
advanced|normalize: True
advanced|limit_to_observed_observations: True
advanced|limit_to_expected_observations: True
advanced|shuffle_samples: True
name: value
observed.biom
expected.biom
value