| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_get_tool_perf_table/ct_get_tool_perf_table/1.1.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_get_tool_perf_table/ct_get_tool_perf_table/1.1.0+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_get_tool_perf_table/ct_get_tool_perf_table/1.1.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_get_tool_perf_table/ct_get_tool_perf_table/1.0.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/ct_get_tool_perf_table/ct_get_tool_perf_table/1.0.0+galaxy0 |
| ct_get_tool_perf_table |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| cell-types-analysis | 0.1.9 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_files: ['results_dir/garnett_output.txt', 'results_dir/scmap-cell_output.txt', 'results_dir/scmap-cluster_output.txt', 'results_dir/scpred_output.txt'] ref_file: reference_sdrf.tsv exclusions: exclusions.yml lab_cl_mapping: label_cl_dict.rds barcode_col_ref: Assay barcode_col_pred: cell_id label_col_ref: Sample Characteristic[cell type] label_col_pred: predicted_label |
name: value |
results_dir/garnett_output.txt results_dir/scmap-cell_output.txt results_dir/scmap-cluster_output.txt results_dir/scpred_output.txt reference_sdrf.tsv exclusions.yml label_cl_dict.rds value |