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Repository revision

Revision: 2:95b1216e1e70

Repository 'schicexplorer_schicplotconsensusmatrices'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/schicexplorer_schicplotconsensusmatrices

scHicPlotConsensusMatrices tool metadata

Miscellaneous

Name: scHicPlotConsensusMatrices

Description: plot single-cell Hi-C interaction matrices cluster consensus matrices

Id: schicexplorer_schicplotconsensusmatrices

Guid: toolshed.g2.bx.psu.edu/repos/iuc/schicexplorer_schicplotconsensusmatrices/schicexplorer_schicplotconsensusmatrices/4.1

Version: 4.1

Version command string: scHicPlotConsensusMatrices --version

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/schicexplorer_schicplotconsensusmatrices/schicexplorer_schicplotconsensusmatrices/4.1 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/schicexplorer_schicplotconsensusmatrices/schicexplorer_schicplotconsensusmatrices/4.0

toolshed.g2.bx.psu.edu/repos/iuc/schicexplorer_schicplotconsensusmatrices/schicexplorer_schicplotconsensusmatrices/1.0

schicexplorer_schicplotconsensusmatrices

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

schicexplorer

4

package

Functional tests

name

inputs

outputs

required files

Test-1

matrix_scooler: scHicConsensusMatrices/consensus_matrix.scool
dpi: 300
image_file_format: png

name: value

scHicConsensusMatrices/consensus_matrix.scool
value

Test-2

matrix_scooler: scHicConsensusMatrices/consensus_matrix.scool
chromosomes: chr1 chr2
dpi: 300
image_file_format: png

name: value

scHicConsensusMatrices/consensus_matrix.scool
value