Galaxy |

Repository revision

Revision: 6:97483e5ec21e

Repository 'ucsc_cell_browser'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser

UCSC Cell Browser tool metadata

Miscellaneous

Name: UCSC Cell Browser

Description: displays single-cell clusterized data in an interactive web application.

Id: ucsc_cell_browser

Guid: toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/1.0.0+galaxy1

Version: 1.0.0+galaxy1

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/1.0.0+galaxy1 (this tool)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/1.0.0+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/0.7.10+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/0.5.43+galaxy1

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/0.5.43+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/0.5.21+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/ucsc_cell_browser/ucsc_cell_browser/0.4.38+galaxy0

ucsc_cell_browser

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

ucsc-cell-browser

1.0.0

package

Functional tests

name

inputs

outputs

required files

Test-1

input_type|input_anndata_file: E-MTAB-6077.project.h5ad
input_type|marker_field: markers_louvain_resolution_0.7
input_type|cluster_field: louvain_resolution_0.7
input_type|expression_source: scanpy

name: value

E-MTAB-6077.project.h5ad
value