Repository revision
15:d52b8947b269

Repository 'bcftools_plugin_fixploidy'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy

bcftools fixploidy tool metadata
Miscellaneous
bcftools fixploidy
plugin Fix ploidy
bcftools_plugin_fixploidy
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.10
1.10
bcftools 2>&1 | grep 'Version:'
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.15.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.10 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.9+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.9
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.4.0
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.3.1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_fixploidy/bcftools_plugin_fixploidy/1.3.0
bcftools_plugin_fixploidy
Requirements (dependencies defined in the <requirements> tag set)
name version type
bcftools 1.10 package
htslib 1.10 package
Functional tests
name inputs outputs required files
Test-1 input_file: fixploidy.vcf
sec_plugin|ploidy_file: fixploidy.ploidy
sec_plugin|sex: fixploidy.samples
output_type: v
 name: value
 fixploidy.vcf
fixploidy.ploidy
fixploidy.samples
value