| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrectmatrix/hicexplorer_hiccorrectmatrix/1.7.2.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrectmatrix/hicexplorer_hiccorrectmatrix/1.7.1.0 (this tool) |
| hicexplorer_hiccorrectmatrix |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 2.7.13 | package |
| hicexplorer | 1.7.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
mode|mode_selector: correct chromosomes_1|chromosome: chr3LHet chromosomes_0|chromosome: chrUextra matrix: hicBuildMatrix_result1.h5 |
outFileName: hicCorrectMatrix_result1.npz.h5 |
hicBuildMatrix_result1.h5 hicCorrectMatrix_result1.npz.h5 |
| Test-2 |
mode|mode_selector: diagnostic_plot chromosomes_1|chromosome: chr3LHet chromosomes_0|chromosome: chrUextra matrix: hicBuildMatrix_result1.h5 |
diagnostic_plot: diagnostic_plot.png |
hicBuildMatrix_result1.h5 diagnostic_plot.png |