| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/deg_annotate/deg_annotate/1.1.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/deg_annotate/deg_annotate/1.0 |
| deg_annotate |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bedtools | 2.27.0 | package |
| bcbiogff | 0.6.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_table: deseq2_output.tabular annotation: annotation.gtf |
attributes: name |
deseq2_output.tabular annotation.gtf name |
| Test-2 |
input_table: dexseq_output.tabular mode: dexseq annotation: annotation.gtf |
attributes: name |
dexseq_output.tabular annotation.gtf name |
| Test-3 |
input_table: edger_output.tabular mode: degseq annotation: annotation.gtf |
attributes: name |
edger_output.tabular annotation.gtf name |