Repository revision
4:eb30e34367b1

Repository 'scanpy_integrate_mnn'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_integrate_mnn

Scanpy MNN tool metadata
Miscellaneous
Scanpy MNN
correct batch effects by matching mutual nearest neighbors
scanpy_integrate_mnn
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_integrate_mnn/scanpy_integrate_mnn/1.6.0+galaxy1
1.6.0+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_integrate_mnn/scanpy_integrate_mnn/1.7.2+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_integrate_mnn/scanpy_integrate_mnn/1.6.0+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_integrate_mnn/scanpy_integrate_mnn/1.6.0+galaxy0
scanpy_integrate_mnn
Requirements (dependencies defined in the <requirements> tag set)
name version type
scanpy-scripts 0.3.2 package
Functional tests
name inputs outputs required files
Test-1 input_obj_file: find_cluster.h5
input_format: anndata
output_format: anndata
batch_key: louvain
name: value
find_cluster.h5
value
Test-2 input_obj_file: find_cluster.h5
input_format: anndata
output_format: anndata
name: value
find_cluster.h5
value