| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/4.1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/4.0 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/3.3 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/3.2.1 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/3.0.1 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/3.0.0 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/2.1.0 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/2.0.0 |
| toolshed.g2.bx.psu.edu/repos/artbio/cherry_pick_fasta/cherry_pick_fasta/1.0.0 |
| cherry_pick_fasta |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 3.8.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: input_withspace.fa search|match: include search|searchfor: with search|query: type=rRNA |
name: value |
input_withspace.fa value |
| Test-2 |
input: input.fa search|match: exact search|searchfor: without search|query: gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_65_Transcript_1/2_Confidence_0.667_Length_1344_hit1_IdMatch=43.46,AligLength=451,E-val=2e-122 |
name: value |
input.fa value |
| Test-3 |
input: input.fa search|match: exact search|searchfor: with search|query: gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_65_Transcript_1/2_Confidence_0.667_Length_1344_hit1_IdMatch=43.46,AligLength=451,E-val=2e-122 |
name: value |
input.fa value |
| Test-4 |
input: input.fa search|match: exact search|searchfor: without search|query: alt_termlist.txt search|options_selector: textdataset |
name: value |
input.fa alt_termlist.txt value |
| Test-5 |
input: input.fa search|match: exact search|searchfor: with search|query: alt_termlist.txt search|options_selector: textdataset |
name: value |
input.fa alt_termlist.txt value |
| Test-6 |
input: input.fa search|searchfor: with search|query: gi|81971654 |
name: value |
input.fa value |
| Test-7 |
input: input.fa search|searchfor: without search|query: RNA |
name: value |
input.fa value |
| Test-8 |
input: input.fa search|searchfor: without search|query: termlist.txt search|options_selector: textdataset |
name: value |
input.fa termlist.txt value |
| Test-9 |
input: input.fa search|searchfor: without search|query: termlist.txt search|options_selector: textdataset |
name: value |
input.fa termlist.txt value |