Galaxy |

Repository revision

Revision: 6:f5db0e853f57

Repository 'seurat_read10x'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x

Seurat Read10x tool metadata

Miscellaneous

Name: Seurat Read10x

Description: Loads Tabular or 10x data into a serialized seurat R object

Id: seurat_read10x

Guid: toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/4.0.4+galaxy0

Version: 4.0.4+galaxy0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/4.0.4+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/3.2.3+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/3.1.2+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/3.1.1+galaxy1

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/3.1.1_0.0.6+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_read10x/seurat_read10x/2.3.1+galaxy1

seurat_read10x

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

seurat-scripts

4.0.0

package

Functional tests

name

inputs

outputs

required files

Test-1

input|matrix: E-MTAB-6077_3k_features_90_cells_matrix.txt
input|genes: E-MTAB-6077_3k_features_90_cells_genes.tsv
input|barcodes: E-MTAB-6077_3k_features_90_cells_barcodes.tsv
input|format: mtx

name: value

E-MTAB-6077_3k_features_90_cells_matrix.txt
E-MTAB-6077_3k_features_90_cells_genes.tsv
E-MTAB-6077_3k_features_90_cells_barcodes.tsv
value