Revision: 4:4147dc085d45

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data

Miscellaneous

Name: Seurat ScaleData

Description: scale and center genes

Id: seurat_scale_data

Guid: toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data/seurat_scale_data/3.1.2+galaxy0

Version: 3.1.2+galaxy0

Version command string: echo $(R --version | grep version | grep -v GNU)", seurat version" $(R --vanilla --slave -e "library(seurat); cat(sessionInfo()\$otherPkgs\$seurat\$Version)" 2> /dev/null | grep -v -i "WARNING: ")

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data/seurat_scale_data/3.2.3+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data/seurat_scale_data/3.1.2+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data/seurat_scale_data/3.1.1+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data/seurat_scale_data/3.1.1_0.0.6+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_scale_data/seurat_scale_data/2.3.1+galaxy1

seurat_scale_data

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name	version	type
seurat-scripts	0.0.8	package

Functional tests

name	inputs	outputs	required files
Test-1	input|rds_seurat_file: variable_genes_seurat.rds use_umi: True	name: value	variable_genes_seurat.rds value