Repository revision
119:7bb98e9296e9

Repository 'structurefold'
hg clone https://toolshed.g2.bx.psu.edu/repos/tyty/structurefold

Iterative Mapping tool metadata
Miscellaneous
iteratively maps the raw reads of RNA structural data to the reference transcriptome
iterative_map_pipeline
toolshed.g2.bx.psu.edu/repos/tyty/structurefold/iterative_map_pipeline/1.0
1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/tyty/structurefold/iterative_map_pipeline/1.0 (this tool)
iterative_map_pipeline
Requirements (dependencies defined in the <requirements> tag set)
name version type
biopython 1.61 package
numpy 1.7.1 package
samtools 0.1.18 package
bowtie 0.12.7 package
Functional tests
name inputs outputs required files
Test-1 shift: 1
length: 21
reference_file: rRNA.txt
output: mapped.out
rRNA.txt
mapped.out