Repository revision
8:54f751e413f4

Repository 'diamond'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/diamond

Diamond makedb tool metadata
Miscellaneous
Build database from a FASTA file
bg_diamond_makedb
toolshed.g2.bx.psu.edu/repos/bgruening/diamond/bg_diamond_makedb/2.0.8
2.0.8
diamond version | cut -d" " -f 3
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/diamond/bg_diamond_makedb/2.0.8 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/diamond/bg_diamond_makedb/0.6.13
bg_diamond_makedb
Requirements (dependencies defined in the <requirements> tag set)
name version type
diamond 2.0.8 package
Functional tests
name inputs outputs required files
Test-1 infile: db.fasta
name: value
db.fasta
value
Test-2 infile: db.fasta
tax_cond|taxonmap: prot.accession2taxid
tax_cond|taxonnodes: nodes.dmp
tax_cond|taxonnames: names.dmp
tax_cond|tax_select: yes
name: value
db.fasta
prot.accession2taxid
nodes.dmp
names.dmp
value