Repository revision
5:c380b7da5b65

Repository 'data_manager_fetch_tx2gene'
hg clone https://toolshed.g2.bx.psu.edu/repos/ieguinoa/data_manager_fetch_tx2gene

Create entries in tx2gene data table tool metadata
Miscellaneous
fetching
data_manager_fetch_tx2gene
toolshed.g2.bx.psu.edu/repos/ieguinoa/data_manager_fetch_tx2gene/data_manager_fetch_tx2gene/0.0.1
0.0.1
None
False
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ieguinoa/data_manager_fetch_tx2gene/data_manager_fetch_tx2gene/0.0.1 (this tool)
data_manager_fetch_tx2gene
Requirements (dependencies defined in the <requirements> tag set)
name version type
bioconductor-genomicfeatures 1.32.3 package
r-getopt not provided package
Additional information about this tool
python "$__tool_directory__"/data_manager_fetch_tx2gene.py "${out_file}"
       --type $file_type
       --dbkey_description ${ dbkey.get_display_text() }
       --base_dir $__tool_directory__
        
    
None
False
Functional tests
name inputs outputs required files
Test-1 dbkey: anoGam1
sequence_name:
sequence_id:
reference_source|input_fasta: phiX174.fasta
reference_source|reference_source_selector: history
name: value
phiX174.fasta
value