Repository revision
3:663e6f115a76

Repository 'xarray_coords_info'
hg clone https://toolshed.g2.bx.psu.edu/repos/ecology/xarray_coords_info

NetCDF xarray Coordinate Info tool metadata
Miscellaneous
Get values for each coordinate of a Netcdf file
xarray_coords_info
toolshed.g2.bx.psu.edu/repos/ecology/xarray_coords_info/xarray_coords_info/2022.3.0+galaxy0
2022.3.0+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ecology/xarray_coords_info/xarray_coords_info/2022.3.0+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/ecology/xarray_coords_info/xarray_coords_info/0.20.2+galaxy0
toolshed.g2.bx.psu.edu/repos/ecology/xarray_coords_info/xarray_coords_info/0.18.2+galaxy0
toolshed.g2.bx.psu.edu/repos/ecology/xarray_coords_info/xarray_coords_info/@TOOL_VERSION+galaxy0
xarray_coords_info
Requirements (dependencies defined in the <requirements> tag set)
name version type
xarray 2022.3.0 package
python 3.10 package
netcdf4 1.6.0 package
pandas 1.4.3 package
Additional information about this tool
mkdir output_dir &&
        echo "Galaxy xarray version 2022.3.0"> output_dir/version.tabular &&
        python3 '$__tool_directory__/xarray_info.py' '$input' --coords_info output_dir
        
None
False
Functional tests
name inputs outputs required files
Test-1 input: dataset-ibi-reanalysis-bio-005-003-monthly-regulargrid_1510914389133.nc
dataset-ibi-reanalysis-bio-005-003-monthly-regulargrid_1510914389133.nc