Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/johnheap/vapper/VAP/1.1.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/johnheap/vapper/VAP/1.0.0 |
toolshed.g2.bx.psu.edu/repos/johnheap/vapper/VAP/0.0.5 |
VAP |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
velvet | 1.2.10 | package |
HMMER | 3.1b2 | package |
bowtie2 | 2.2.6 | package |
samtools | 1.6 | package |
cufflinks | 2.2.1 | package |
blast | 2.7.1 | package |
EMBOSS | 6.6.0.0 | package |
seaborn | 0.8.0 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
TrypType|GT|contigs|contig: Test.fa TrypType|GT|contigs|preassem: Contig available TrypType|GT|analysis: Genomic P: False TrypType|species: Trypanosoma congolense xname: Test |
attributes: name |
Test.fa name |