| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicdetectloops/hicexplorer_hicdetectloops/3.4.1.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicdetectloops/hicexplorer_hicdetectloops/3.3.1.0 (this tool) |
| hicexplorer_hicdetectloops |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| hicexplorer | 3.3.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
windowSize: 5 peakWidth: 2 maxLoopDistance: 30000000 matrix_h5_cooler: small_test_matrix.cool pValue: 0.5 pValuePreselection: 0.55 |
attributes: name |
small_test_matrix.cool name |