Repository revision
5:b8755bb5bc56

Repository 'hicexplorer_hicquickqc'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc

hicQuickQC tool metadata
Miscellaneous
hicQuickQC
get a first quality estimate of Hi-C data
hicexplorer_hicquickqc
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc/hicexplorer_hicquickqc/3.4.3.0
3.4.3.0
hicQuickQC --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc/hicexplorer_hicquickqc/3.6+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc/hicexplorer_hicquickqc/3.4.3.0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc/hicexplorer_hicquickqc/3.4.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc/hicexplorer_hicquickqc/3.4.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicquickqc/hicexplorer_hicquickqc/3.3.1.0
hicexplorer_hicquickqc
Requirements (dependencies defined in the <requirements> tag set)
name version type
hicexplorer 3.4.3 package
Functional tests
name inputs outputs required files
Test-1 samFiles_0|samFile: small_test_R1_unsorted.sam
samFiles_1|samFile: small_test_R2_unsorted.sam
lines: 1000
name: value
small_test_R1_unsorted.sam
small_test_R2_unsorted.sam
value