| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy6 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy5 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy4 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy3 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.2+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.0.8_beta+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.0.8_beta+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.0.8_beta |
| kraken2_build_database |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| kraken2 | 2.1.3 | package |
| python | 3.13 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
database_type|custom_fasta: adapter.fa database_type|custom_database_name: custom_database database_type|custom_source_info: from adapter.fa test data database_type|skip_maps: True database_type|kmer_len: 35 database_type|minimizer_spaces: 6 database_type|load_factor: 0.7 database_type|clean: True database_type|database_type: custom |
name: value |
adapter.fa value |
| Test-2 |
database_type|prebuild|prebuilt_db: viral database_type|prebuild|prebuilt_date: 2022-06-07 database_type|database_type: standard_prebuilt |
name: value |
value |
| Test-3 |
database_type|prebuild|prebuilt_db: viral database_type|prebuild|prebuilt_date: 2024-01-12 database_type|database_type: standard_prebuilt |
name: value |
value |
| Test-4 |
database_type|prebuild|prebuilt_db: viral database_type|prebuild|prebuilt_date: 2024-06-05 database_type|database_type: standard_prebuilt |
name: value |
value |