Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.2+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.2+galaxy0 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.1.1 |
toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.0.8_beta+galaxy2 |
toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.0.8_beta+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kraken2_database/kraken2_build_database/2.0.8_beta |
kraken2_build_database |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
kraken2 | 2.1.2 | package |
python | 3.7 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
database_type|custom_fasta: adapter.fa database_type|custom_database_name: custom_database database_type|skip_maps: True database_type|kmer_len: 35 database_type|minimizer_spaces: 6 database_type|load_factor: 0.7 database_type|clean: False database_type|database_type: custom |
name: value |
adapter.fa value |
Test-2 |
database_type|prebuild|prebuilt_db: standard_08gb database_type|prebuild|prebuilt_date: 2022-06-07 database_type|database_type: standard_prebuilt |
name: value |
value |