Repository revision
18:340aa8042c7f

Repository 'hicexplorer_hiccorrelate'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate

hicCorrelate tool metadata
Miscellaneous
hicCorrelate
compute pairwise correlations between multiple Hi-C contact matrices
hicexplorer_hiccorrelate
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.6+galaxy0
3.6+galaxy0
hicCorrelate --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.6+galaxy1
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.6+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.4.3.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.4.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.4.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/3.3.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/2.1.4.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/2.1.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/2.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/2.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/1.8.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/1.8.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/1.7.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hiccorrelate/hicexplorer_hiccorrelate/1.7.1.0
hicexplorer_hiccorrelate
Requirements (dependencies defined in the <requirements> tag set)
name version type
hicexplorer 3.6 package
Functional tests
name inputs outputs required files
Test-1 input_files_0|matrix: small_test_matrix.h5
input_files_0|mlabel: first
input_files_1|matrix: small_test_matrix.h5
input_files_1|mlabel: second
method: spearman
log1p: True
colormap: jet
name: value
name: value
small_test_matrix.h5
value
Test-2 input_files_0|matrix: small_test_matrix.h5
input_files_0|mlabel: first
input_files_1|matrix: small_test_matrix.h5
input_files_1|mlabel: second
method: spearman
log1p: True
colormap: jet
name: value
name: value
small_test_matrix.h5
value