| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_mapalignerspectrum/MapAlignerSpectrum/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_mapalignerspectrum/MapAlignerSpectrum/2.6+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_mapalignerspectrum/MapAlignerSpectrum/2.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_mapalignerspectrum/MapAlignerSpectrum/2.3.0 |
| MapAlignerSpectrum |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: ['MapAlignerSpectrum_1_input1.mzML', 'MapAlignerSpectrum_1_input2.mzML', 'MapAlignerSpectrum_1_input3.mzML'] algorithm|gapcost: 1.0 algorithm|affinegapcost: 0.5 algorithm|cutoff_score: 0.7 algorithm|bucketsize: 100 algorithm|anchorpoints: 100 algorithm|mismatchscore: -5.0 algorithm|scorefunction: SteinScottImproveScore model|type: interpolated model|linear|symmetric_regression: False model|linear|x_weight: model|linear|y_weight: model|linear|x_datum_min: 1e-15 model|linear|x_datum_max: 1000000000000000.0 model|linear|y_datum_min: 1e-15 model|linear|y_datum_max: 1000000000000000.0 model|b_spline|wavelength: 0.0 model|b_spline|num_nodes: 5 model|b_spline|extrapolate: linear model|b_spline|boundary_condition: 2 model|lowess|span: 0.666666666666667 model|lowess|num_iterations: 3 model|lowess|delta: -1.0 model|lowess|interpolation_type: cspline model|lowess|extrapolation_type: four-point-linear model|interpolated|interpolation_type: cspline model|interpolated|extrapolation_type: two-point-linear adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ['ctd_out_FLAG', 'out_FLAG'] |
name: value |
MapAlignerSpectrum_1_input1.mzML MapAlignerSpectrum_1_input2.mzML MapAlignerSpectrum_1_input3.mzML value |