Repository revision
2:4e87d6ebea62

Repository 'glimmer_acgt_content'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/glimmer_acgt_content

ACGT Content tool metadata
Miscellaneous
ACGT Content
of windows in each sequence
glimmer_acgt_content
toolshed.g2.bx.psu.edu/repos/bgruening/glimmer_acgt_content/glimmer_acgt_content/3.02
3.02
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/glimmer_acgt_content/glimmer_acgt_content/3.02 (this tool)
glimmer_acgt_content
Requirements (dependencies defined in the <requirements> tag set)
name version type
glimmer 3.02 package
biopython 1.70 package
Additional information about this tool
window-acgt
            $percentage
            $input_win_len
            $input_win_skip
            < '$infile' > '$output'

            ##TODO prettify the output
    
None
False
Functional tests
name inputs outputs required files
Test-1 infile: streptomyces_Tu6071_genomic.fasta
name: value
streptomyces_Tu6071_genomic.fasta
value