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Repository revision

Revision: 6:4763362914f4

Repository 'rename_tiff_channels'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels

Rename OME-TIFF channels tool metadata

Miscellaneous

Name: Rename OME-TIFF channels

Description: with ome-types

Id: rename_tiff_channels

Guid: toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.2+galaxy1

Version: 0.0.2+galaxy1

Version command string: echo 0.0.2

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.2+galaxy1 (this tool)

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.2+galaxy0

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.1+galaxy5

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.1+galaxy4

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.1+galaxy3

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/0.0.1+galaxy1

toolshed.g2.bx.psu.edu/repos/goeckslab/rename_tiff_channels/rename_tiff_channels/@TOOL_VERSION@+galaxy1

rename_tiff_channels

Requirements (dependencies defined in the <requirements> tag set)

No requirements defined

Additional information about this tool

Command:

cp '$image' ./renamed_image.ome.tiff && 

        ln -s '$channel_csv' ./channels.csv &&

        python '$script'

Interpreter: None

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

image: rename_test.ome.tiff
channel_csv: rename_channels.csv

name: value

rename_test.ome.tiff
rename_channels.csv
value