Galaxy |

Repository revision

Revision: 9:3524ca06478e

Repository 'mothur_filter_seqs'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_filter_seqs

Filter.seqs tool metadata

Miscellaneous

Name: Filter.seqs

Description: removes columns from alignments

Id: mothur_filter_seqs

Guid: toolshed.g2.bx.psu.edu/repos/iuc/mothur_filter_seqs/mothur_filter_seqs/1.39.5.0

Version: 1.39.5.0

Version command string: mothur "#help()" | sed '7q;d' | cut -d" " -f2

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/mothur_filter_seqs/mothur_filter_seqs/1.39.5.0 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/mothur_filter_seqs/mothur_filter_seqs/1.36.1.0

mothur_filter_seqs

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

mothur

1.39.5

package

Functional tests

name

inputs

outputs

required files

Test-1

fasta: HMP_MOCK.v35.align
inputs_0|fasta: Mock_S280_L001_R1_001_small.trim.contigs.good.align_head
savelog: True

name: value
name: value

HMP_MOCK.v35.align
Mock_S280_L001_R1_001_small.trim.contigs.good.align_head
value

Test-2

fasta: HMP_MOCK.v35.align
savelog: True

name: value
name: value
name: value

HMP_MOCK.v35.align
value