Repository revision
10:ed2231b3edff

Repository 'scanpy_run_paga'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga

Scanpy PAGA tool metadata
Miscellaneous
Scanpy PAGA
trajectory inference
scanpy_run_paga
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.3+galaxy10
1.4.3+galaxy10
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.6.0+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.3+galaxy10 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.3+galaxy9
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.3+galaxy8
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.3+galaxy6
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.3+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_paga/scanpy_run_paga/1.4.2+galaxy0
scanpy_run_paga
Requirements (dependencies defined in the <requirements> tag set)
name version type
scanpy-scripts 0.2.10 package
Functional tests
name inputs outputs required files
Test-1 input_obj_file: compute_graph.h5
output_format: anndata
input_format: anndata
groups: leiden
use_graph: neighbors
 attributes: name
 compute_graph.h5
name