Repository revision
10:63fea23042c4

Repository 'openms_psmfeatureextractor'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor

PSMFeatureExtractor tool metadata
Miscellaneous
Computes extra features for each input PSM.
PSMFeatureExtractor
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.8+galaxy0
2.8+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/3.1+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.8+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.6+galaxy2
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.6+galaxy1
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.6+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.5+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_psmfeatureextractor/PSMFeatureExtractor/2.3.0
PSMFeatureExtractor
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.8 package
openms-thirdparty 2.8 package
omssa 2.1.9 package
blast 2.13.0 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in_cond|in: ['MSGFPlusAdapter_1_out.idXML', 'XTandemAdapter_1_out.idXML']
out_type: idXML
multiple_search_engines: True
adv_opts|skip_db_check: True
adv_opts|test: true
name: value
MSGFPlusAdapter_1_out.idXML
XTandemAdapter_1_out.idXML
value
Test-2 in_cond|in: ['MSGFPlusAdapter_1_out.idXML', 'XTandemAdapter_1_out.idXML']
out_type: mzid
multiple_search_engines: True
adv_opts|skip_db_check: True
adv_opts|test: true
name: value
MSGFPlusAdapter_1_out.idXML
XTandemAdapter_1_out.idXML
value
Test-3 in_cond|in: MSGFPlusAdapter_1_out.idXML
in_cond|in_select: yes
out_type: idXML
adv_opts|test: true
name: value
MSGFPlusAdapter_1_out.idXML
value