| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/frogs/frogs/FROGSSTAT_DESeq2_Visualisation/4.1.0+galaxy3 |
| toolshed.g2.bx.psu.edu/repos/frogs/frogs/FROGSSTAT_DESeq2_Visualisation/3.2.2 (this tool) |
| FROGSSTAT_DESeq2_Visualisation |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| frogs | 3.2.2 | package |
| r-base | 3.6.3 | package |
| r-essentials | 3.6 | package |
| bioconductor-phyloseq | 1.30.0 | package |
| bioconductor-deseq2 | 1.26.0 | package |
| r-dt | 0.17 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_phyloseq: references/16-phylo_import.Rdata input_DDS: references/23-deseq2_preprocess.Rdata var: EnvType varType|mod1: BoeufHache varType|mod2: SaumonFume padj: 0.05 |
name: value |
references/16-phylo_import.Rdata references/23-deseq2_preprocess.Rdata value |