Repository revision
0:834843ebe569

Repository 'frogs'
hg clone https://toolshed.g2.bx.psu.edu/repos/frogs/frogs

FROGS Clustering swarm tool metadata
Miscellaneous
Single-linkage clustering on sequences
FROGS_clustering
toolshed.g2.bx.psu.edu/repos/frogs/frogs/FROGS_clustering/3.2.2
3.2.2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/frogs/frogs/FROGS_clustering/4.2.0+galaxy1
toolshed.g2.bx.psu.edu/repos/frogs/frogs/FROGS_clustering/3.2.2 (this tool)
FROGS_clustering
Requirements (dependencies defined in the <requirements> tag set)
name version type
frogs 3.2.2 package
swarm 3.0.0 package
Functional tests
name inputs outputs required files
Test-1 sequence_file: references/01-prepro-vsearch.fasta
count_file: references/01-prepro-vsearch.tsv
FROGS_guidelines|maximal_distance: 3
FROGS_guidelines|denoising: True
FROGS_guidelines|guidelines_version: 3.1
name: value
name: value
name: value
references/01-prepro-vsearch.fasta
references/01-prepro-vsearch.tsv
value
Test-2 sequence_file: references/01-prepro-vsearch.fasta
count_file: references/01-prepro-vsearch.tsv
FROGS_guidelines|maximal_distance: 1
FROGS_guidelines|fastidious: True
FROGS_guidelines|guidelines_version: 3.2
name: value
name: value
name: value
references/01-prepro-vsearch.fasta
references/01-prepro-vsearch.tsv
value