| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/heinz/heinz_scoring/1.0 (this tool) |
| heinz_scoring |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| pandas | 0.19.2 | package |
| numpy | 1.12.0 | package |
| Additional information about this tool |
python '$__tool_directory__/heinz_scoring.py' -n '$node' -f '$FDR' -o '$score'
#if str( $input_type.input_type_selector ) == "bum_type":
-l '$input_type.lambda' -a '$input_type.alpha'
#else:
-m '$input_type.input_bum'
#end if
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
node: genes_with_a_p_value.csv input_type|lambda: 0.546 FDR: 0.001 input_type|input_type_selector: bum_type input_type|alpha: 0.453 |
attributes: name |
genes_with_a_p_value.csv name |
| Test-2 |
node: genes_with_a_p_value.csv input_type|input_type_selector: bum_output input_type|input_bum: BUM_output.txt FDR: 0.001 |
attributes: name |
genes_with_a_p_value.csv BUM_output.txt name |