Repository revision
1:a54de7e658f7

Repository 'bowtie2'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bowtie2

Bowtie2 tool metadata
Miscellaneous
Bowtie2
is a short-read aligner
bowtie2
toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2
0.2
bowtie2 --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.3
toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 (this tool)
bowtie2
Requirements (dependencies defined in the <requirements> tag set)
name version type
bowtie2 2.1.0 package
samtools 0.1.18 package
Functional tests
name inputs outputs required files
Test-1 library|input_1: bowtie2/phix_reads.fastq
library|type: single
unaligned_file: False
reference_genome|own_file: bowtie2/phix_genome.fasta
reference_genome|source: history
read_group|selection: no
params|full: no
name: value
bowtie2/phix_reads.fastq
bowtie2/phix_genome.fasta
value