Galaxy |

hicPlotViewpoint tool metadata

Miscellaneous

Name: hicPlotViewpoint

Description: plot interactions around a viewpoint

Id: hicexplorer_hicplotviewpoint

Guid: toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/3.4.3.0

Version: 3.4.3.0

Version command string: hicPlotViewpoint --version

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/3.6+galaxy0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/3.4.3.0 (this tool)

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/3.4.2.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/3.4.1.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/3.3.1.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/2.1.4.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/2.1.2.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/2.1.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotviewpoint/hicexplorer_hicplotviewpoint/2.0.0

hicexplorer_hicplotviewpoint

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

hicexplorer

3.4.3

package

Functional tests

name

inputs

outputs

required files

Test-1

matrix_h5_cooler_multiple: Li_et_al_2015.cool
region: X:3000000-3500000
referencePoint: X:3200000
image_file_format: png

name: value

Li_et_al_2015.cool
value

Test-2

matrix_h5_cooler_multiple: Li_et_al_2015.cool
region: X:3000000-3500000
referencePoint: X:3200000-3300000
interactionOutFileName: True
image_file_format: png

name: value
name: value

Li_et_al_2015.cool
value