Repository revision
58:07ff622ec007

Repository 'peptideshaker'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker

Identification Parameters tool metadata
Miscellaneous
Sets the identification parameters to be used in SearchGUI and PeptideShaker apps
ident_params
toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker/ident_params/4.0.25+galaxy0
4.0.25+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker/ident_params/4.0.25+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker/ident_params/1.5.1
ident_params
Requirements (dependencies defined in the <requirements> tag set)
name version type
searchgui 4.0.25 package
Functional tests
name inputs outputs required files
Test-1 searchengines_options|xtandem|xtandem_refine|xtandem_refine_selector: no
searchengines_options|xtandem|xtandem_advanced: yes
name: value
value
Test-2 spectrum_matching_options|fixed_modifications: Carbamidomethylation of C
spectrum_matching_options|variable_modifications: Oxidation of M
spectrum_matching_options|precursor_ion_tol: 100
spectrum_matching_options|min_charge: 1
spectrum_matching_options|max_charge: 3
searchengines_options|xtandem|xtandem_refine|xtandem_refine_selector: yes
searchengines_options|xtandem|xtandem_advanced: yes
name: value
value