Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/spades_biosyntheticspades/spades_biosyntheticspades/3.15.3+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/spades_biosyntheticspades/spades_biosyntheticspades/3.15.3+galaxy0 (this tool) |
spades_biosyntheticspades |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
spades | 3.15.3 | package |
zip | 3.0 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
singlePaired|input1: ecoli_1K.fastq.gz singlePaired|sPaired: paired_interlaced |
name: value name: value name: value name: value |
ecoli_1K.fastq.gz value |
Test-2 |
singlePaired|input1: ecoli_1K_1.fastq.gz singlePaired|input2: ecoli_1K_2.fastq.gz singlePaired|sPaired: paired arf|nanopore: ecoli_1K.fastq.gz kmer_cond|manual: 33 kmer_cond|kmer_sel: manual phred_offset: 33 mode_sel: --iontorrent optional_output: ['rs', 'l'] |
name: value |
ecoli_1K_1.fastq.gz ecoli_1K_2.fastq.gz ecoli_1K.fastq.gz value |
Test-3 |
singlePaired|input1: ecoli_1K.fastq.gz singlePaired|sPaired: paired_interlaced optional_output: ['rs', 'b'] |
name: value name: value |
ecoli_1K.fastq.gz value |