| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.3.0.0.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.2.1.0.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.2.0.0.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.1.2.0.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.1.0.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.0.2.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.0.1.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_alignmentsieve/deeptools_alignmentsieve/3.0.0.0 |
| deeptools_alignmentsieve |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| deeptools | 3.2.1 | package |
| samtools | 1.9 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
filterMetrics: True minMappingQuality: 10 bamfile: paired_chr2L.bam |
attributes: name attributes: name |
paired_chr2L.bam name |
| Test-2 |
shift: 1 -2 3 -4 minMappingQuality: 10 bamfile: paired_chr2L.bam BED: True |
attributes: name |
paired_chr2L.bam name |
| Test-3 |
shift: 1 -2 3 -4 minMappingQuality: 10 bamfile: paired_chr2L.bam |
attributes: name |
paired_chr2L.bam name |
| Test-4 |
shift: 1 -2 3 -4 minMappingQuality: 10 bamfile: paired_chr2L.cram |
attributes: name |
paired_chr2L.cram name |