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Repository revision

Revision: 12:723b5adb91e4

Repository 'vgx_converter'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/computationaltranscriptomics/vgx_converter

SIF-to-VGX tool metadata

Miscellaneous

Name: SIF-to-VGX

Description: Converts a SIF file to a JSON file in node-link format for visualization in VisualGraphX

Id: vgx_converter

Guid: toolshed.g2.bx.psu.edu/repos/computationaltranscriptomics/vgx_converter/vgx_converter/0.0.2

Version: 0.0.2

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/computationaltranscriptomics/vgx_converter/vgx_converter/0.0.3

toolshed.g2.bx.psu.edu/repos/computationaltranscriptomics/vgx_converter/vgx_converter/0.0.2 (this tool)

toolshed.g2.bx.psu.edu/repos/computationaltranscriptomics/vgx_converter/vgx_converter/0.0.1

vgx_converter

Requirements (dependencies defined in the <requirements> tag set)

No requirements defined

Functional tests

name

inputs

outputs

required files

Test-1

input2: cvt_attributes.venn
delimiter: space
input1: cvt_network.sif

cvt_network.sif
cvt_attributes.venn

Test-2

delimiter: tab
input1: angiogenesis_network.sif

angiogenesis_network.sif