| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/trinity_ctat/ctat_abundance_estimation_to_matrix/ctat_abundance_estimation_to_matrix/1.0.0 (this tool) |
| ctat_abundance_estimation_to_matrix |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 2.7 | package |
| subprocess32 | not provided | package |
| bzip2 | not provided | package |
| rsem | 1.3.0 | package |
| bioconductor-edger | 3 | package |
| bioconductor-qvalue | 2 | package |
| trinity | 2.6.6 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
RSEM_samples_0|column_label: Sp_ds RSEM_samples_1|file: Sp_hs.RSEM.genes.results RSEM_samples_0|file: Sp_ds.RSEM.genes.results RSEM_samples_1|column_label: Sp_hs |
attributes: name attributes: name |
Sp_ds.RSEM.genes.results Sp_hs.RSEM.genes.results name |