Repository revision
11:8511b6d85fc7

Repository 'seqtk'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seqtk

seqtk_mergefa tool metadata
Miscellaneous
Merge two FASTA/Q files into a FASTA file output
seqtk_mergefa
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mergefa/1.5+galaxy1
1.5+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mergefa/1.5+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mergefa/1.4+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mergefa/1.4+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mergefa/1.0-r75-dirty.0
seqtk_mergefa
Requirements (dependencies defined in the <requirements> tag set)
name version type
seqtk 1.5 package
pigz 2.8 package
Additional information about this tool
seqtk mergefa
-q $q
$i
$m
$r
$h
'$in_fa1'
'$in_fa2'
#echo "| pigz -p ${GALAXY_SLOTS:-1} --no-name --no-time" if $in_fa1.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default'
    
None
False
Functional tests
name inputs outputs required files
Test-1 in_fa1: seqtk_mergefa1.fa
in_fa2: seqtk_mergefa2.fa
name: value
seqtk_mergefa1.fa
seqtk_mergefa2.fa
value
Test-2 in_fa1: seqtk_mergefa1.fa
in_fa2: seqtk_mergefa2.fa
m: True
name: value
seqtk_mergefa1.fa
seqtk_mergefa2.fa
value
Test-3 in_fa1: seqtk_mergefa1.fa.gz
in_fa2: seqtk_mergefa2.fa.gz
m: True
name: value
seqtk_mergefa1.fa.gz
seqtk_mergefa2.fa.gz
value