| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_fqchk/1.4+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_fqchk/1.0-r75-dirty.0 |
| seqtk_fqchk |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| seqtk | 1.4 | package |
| pigz | 2.3.4 | package |
| gawk | 4.2.1 | package |
| Additional information about this tool |
seqtk fqchk
-q $q
'$in_file' | awk '{if(NR<4){print "#"$0}else{print $0}}'
> '$default'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in_file: seqtk_fqchk.fq |
name: value |
seqtk_fqchk.fq value |
| Test-2 |
in_file: seqtk_fqchk.fq.gz |
name: value |
seqtk_fqchk.fq.gz value |