Repository revision
10:a019807f4e67

Repository 'seqtk'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seqtk

seqtk_hety tool metadata
Miscellaneous
seqtk_hety
regional heterozygosity
seqtk_hety
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_hety/1.4+galaxy0
1.4+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_hety/1.4+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_hety/1.3.1
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_hety/1.0-r75-dirty.0
seqtk_hety
Requirements (dependencies defined in the <requirements> tag set)
name version type
seqtk 1.4 package
pigz 2.3.4 package
gawk 4.2.1 package
Additional information about this tool
seqtk hety
-w $w
-t $t
$m
'$in_file' | awk 'BEGIN{print "#chr\tstart\tend\tA\tB\tnum_het"}1'
> '$default'
    
None
False
Functional tests
name inputs outputs required files
Test-1 in_file: seqtk_hety.fa
w: 8
name: value
seqtk_hety.fa
value
Test-2 in_file: seqtk_hety.fa.gz
w: 8
name: value
seqtk_hety.fa.gz
value