Repository revision
10:a019807f4e67

Repository 'seqtk'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/seqtk

seqtk_mutfa tool metadata
Miscellaneous
seqtk_mutfa
point mutate FASTA at specified positions
seqtk_mutfa
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mutfa/1.4+galaxy0
1.4+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mutfa/1.4+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mutfa/1.3.1
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mutfa/1.3.0
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mutfa/1.2.0
toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_mutfa/1.0-r75-dirty.0
seqtk_mutfa
Requirements (dependencies defined in the <requirements> tag set)
name version type
seqtk 1.4 package
pigz 2.3.4 package
Additional information about this tool
seqtk mutfa
'$in_file'
'$in_snp'

    #echo "| pigz -p ${GALAXY_SLOTS:-1} --no-name --no-time" if $in_file.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default'
    
    
None
False
Functional tests
name inputs outputs required files
Test-1 in_file: seqtk_mutfa.fa
in_snp: seqtk_mutfa.snp
name: value
seqtk_mutfa.fa
seqtk_mutfa.snp
value
Test-2 in_file: seqtk_mutfa.fa.gz
in_snp: seqtk_mutfa.snp
name: value
seqtk_mutfa.fa.gz
seqtk_mutfa.snp
value