| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_sample/1.4+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_sample/1.3.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/seqtk/seqtk_sample/1.0-r75-dirty.0 |
| seqtk_sample |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| seqtk | 1.4 | package |
| pigz | 2.3.4 | package |
| Additional information about this tool |
seqtk sample
-s $s
$advanced.single_pass_mode
'$in_file'
$subsample_size
#echo "| pigz -p ${GALAXY_SLOTS:-1} --no-name --no-time" if $in_file.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in_file: seqtk_sample.fa s: 4 subsample_size: 4 advanced|single_pass_mode: True |
name: value |
seqtk_sample.fa value |
| Test-2 |
in_file: seqtk_sample.fa.gz s: 4 subsample_size: 4 advanced|single_pass_mode: True |
name: value |
seqtk_sample.fa.gz value |
| Test-3 |
in_file: seqtk_sample.fa.gz s: 4 subsample_size: 4 advanced|single_pass_mode: False |
name: value |
seqtk_sample.fa.gz value |