Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/3.4.2.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/3.4.1.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/3.3.1.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/2.1.4.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/2.1.2.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/2.1.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/2.0.2 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/2.0.1 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/2.0.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/1.8.1.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/1.8.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/1.7.2.0 |
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicbuildmatrix/hicexplorer_hicbuildmatrix/1.7.1.0 |
hicexplorer_hicbuildmatrix |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
hicexplorer | 3.4.1 | package |
samtools | 1.9 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
outputFormat: h5 restrictionCutFileBinSize_conditional|restrictionCutFileBinSize_selector: optionBinSize samFiles_1|samFile: small_test_R2_unsorted.sam samFiles_0|samFile: small_test_R1_unsorted.sam restrictionCutFileBinSize_conditional|binSizes_0|binSize: 5000 outBam_Boolean: True |
attributes: name attributes: name attributes: name |
small_test_R1_unsorted.sam small_test_R2_unsorted.sam name |
Test-2 |
outputFormat: cool restrictionCutFileBinSize_conditional|restrictionCutFileBinSize_selector: optionBinSize samFiles_1|samFile: small_test_R2_unsorted.sam samFiles_0|samFile: small_test_R1_unsorted.sam restrictionCutFileBinSize_conditional|binSizes_0|binSize: 5000 outBam_Boolean: True |
attributes: name attributes: name attributes: name |
small_test_R1_unsorted.sam small_test_R2_unsorted.sam name |