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Repository revision

Revision: 6:0d713384d8d8

Repository 'scmap_get_std_output'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output

Scmap get standard output tool metadata

Miscellaneous

Name: Scmap get standard output

Description: Create final output in standard format to allow for downstream analysis of predicted labels by tools of the EBI gene expression group's cell-types-analysis package

Id: scmap_get_std_output

Guid: toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output/scmap_get_std_output/1.6.2+galaxy0

Version: 1.6.2+galaxy0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output/scmap_get_std_output/1.6.3+galaxy0

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output/scmap_get_std_output/1.6.2+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output/scmap_get_std_output/1.6.1+galaxy2

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output/scmap_get_std_output/1.6.0+galaxy2

toolshed.g2.bx.psu.edu/repos/ebi-gxa/scmap_get_std_output/scmap_get_std_output/1.6.0+galaxy1

scmap_get_std_output

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

scmap-cli

0.0.10

package

Functional tests

name

inputs

outputs

required files

Test-1

input_predictions_file: project_cluster.csv
include_scores: True

attributes: name

project_cluster.csv
name