| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/bwameth/bwameth/0.2.0.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/bwameth/bwameth/0.2.0 (this tool) |
| bwameth |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 1.2 | package |
| bwameth | 0.2.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
referenceSource|reference: ref.fa.gz single_or_paired|single_or_paired_opts: paired single_or_paired|input_mate1: t_R1.fastq.gz single_or_paired|input_mate2: t_R2.fastq.gz |
output: output.bam |
ref.fa.gz t_R1.fastq.gz t_R2.fastq.gz output.bam |
| Test-2 |
referenceSource|reference: ref.fa.gz single_or_paired|single_or_paired_opts: paired_collection single_or_paired|input_mate1: paired collection |
output: output.bam |
ref.fa.gz t_R1.fastq.gz t_R2.fastq.gz output.bam |