| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/2.1.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/2.0.4+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/2.0.4 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/2.0.2 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/2.0.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/mz_to_sqlite/mz_to_sqlite/1.2.0 |
| mz_to_sqlite |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| mztosqlite | 2.1.1 | package |
| Additional information about this tool |
mz_to_sqlite
-numthreads "\${GALAXY_SLOTS:-4}"
-dbname 'sqlite.db'
-mzid '$mzinput'
#if len($scanfiles) > 0:
#set $files = " ".join(["'"+ a.strip() + "'" for a in str($scanfiles).split(',')])
-scanfiles $files
#set $dfiles = [a for a in $scanfiles]
-scanFilesDisplayName
#for $f in $dfiles
'$f.display_name'
#end for
#end if
#if len($searchdbs) > 0:
#set $dbFiles = " ".join(["'"+ a.strip() + "'" for a in str($searchdbs).split(',')])
-fasta $dbFiles
#end if
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
mzinput: test_id.mzid scanfiles: test.mgf searchdbs: test.fasta |
name: value |
test_id.mzid test.mgf test.fasta value |