| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell/clc_mapper/0.0.7 (this tool) |
| toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell/clc_mapper/0.0.6 |
| toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell/clc_mapper/0.0.5 |
| toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell/clc_mapper/0.0.4 |
| toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell/clc_mapper/0.0.3 |
| toolshed.g2.bx.psu.edu/repos/peterjc/clc_assembly_cell/clc_mapper/0.0.2 |
| clc_mapper |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 0.1.19 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
references_0|ref_file: NC_010642.fna references_0|ref_type: circular read_group_0|segments|placement: fb read_group_0|segments|dist_mode: ss read_group_0|segments|min_size: 1 read_group_0|segments|max_size: 1000 read_group_0|segments|filename: SRR639755_mito_pairs.fastq.gz read_group_0|segments|type: interleaved discard_unmapped: False |
name: value |
NC_010642.fna SRR639755_mito_pairs.fastq.gz value |
| Test-2 |
references_0|ref_file: NC_010642.fna references_0|ref_type: circular read_group_0|segments|placement: fb read_group_0|segments|dist_mode: ss read_group_0|segments|min_size: 1 read_group_0|segments|max_size: 1000 read_group_0|segments|filename: SRR639755_mito_pairs.fastq.gz read_group_0|segments|type: interleaved discard_unmapped: True |
name: value |
NC_010642.fna SRR639755_mito_pairs.fastq.gz value |