Repository revision
26:2889433c7ae1

Repository 'ncbi_blast_plus'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus

NCBI BLAST+ segmasker tool metadata
Miscellaneous
low-complexity regions in protein sequences
ncbi_segmasker_wrapper
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.3.3
0.3.3
segmasker -version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/2.7.1+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.3.3 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.3.1
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.3.0
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.2.01
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.2.00
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.08
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.07
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.06
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.05
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.04
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.03
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.01
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_segmasker_wrapper/0.1.00
ncbi_segmasker_wrapper
Requirements (dependencies defined in the <requirements> tag set)
name version type
blast 2.7.1 package
Functional tests
name inputs outputs required files
Test-1 db_opts|db_opts_selector: file
db_opts|subject: four_human_proteins.fasta
locut: 2.2
window: 12
outformat: fasta
hicut: 2.5
attributes: name
four_human_proteins.fasta
name
Test-2 db_opts|db_opts_selector: file
db_opts|subject: four_human_proteins.fasta
locut: 2.2
window: 12
outformat: maskinfo_asn1_bin
hicut: 2.5
attributes: name
four_human_proteins.fasta
name
Test-3 db_opts|db_opts_selector: file
db_opts|subject: four_human_proteins.fasta
locut: 2.2
window: 12
outformat: maskinfo_asn1_text
hicut: 2.5
attributes: name
four_human_proteins.fasta
name