| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.3.3 (this tool) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.0.11 |
| ncbi_tblastn_wrapper |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| blast | 2.7.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-10 adv_opts|adv_opts_selector: advanced db_opts|subject: rhodopsin_nucs.fasta adv_opts|parse_deflines: False adv_opts|filter_query: False adv_opts|max_hits: 0 db_opts|database: query: four_human_proteins.fasta adv_opts|word_size: output|out_format: 5 adv_opts|matrix_gapcosts|matrix: BLOSUM80 |
attributes: name |
four_human_proteins.fasta rhodopsin_nucs.fasta name |
| Test-2 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-10 adv_opts|adv_opts_selector: advanced db_opts|subject: rhodopsin_nucs.fasta adv_opts|parse_deflines: False adv_opts|filter_query: False adv_opts|max_hits: 0 db_opts|database: query: four_human_proteins.fasta adv_opts|word_size: output|out_format: ext adv_opts|matrix_gapcosts|matrix: BLOSUM80 |
attributes: name |
four_human_proteins.fasta rhodopsin_nucs.fasta name |
| Test-3 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-10 adv_opts|adv_opts_selector: advanced db_opts|subject: rhodopsin_nucs.fasta adv_opts|parse_deflines: False adv_opts|filter_query: False adv_opts|max_hits: 0 db_opts|database: query: four_human_proteins.fasta adv_opts|word_size: output|out_format: 6 adv_opts|matrix_gapcosts|matrix: BLOSUM80 |
attributes: name |
four_human_proteins.fasta rhodopsin_nucs.fasta name |
| Test-4 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-10 adv_opts|adv_opts_selector: advanced db_opts|subject: rhodopsin_nucs.fasta adv_opts|parse_deflines: True adv_opts|filter_query: False adv_opts|max_hits: 0 db_opts|database: query: four_human_proteins.fasta adv_opts|word_size: output|out_format: 6 adv_opts|matrix_gapcosts|matrix: BLOSUM80 |
attributes: name |
four_human_proteins.fasta rhodopsin_nucs.fasta name |
| Test-5 |
db_opts|db_opts_selector: file evalue_cutoff: 1e-10 adv_opts|adv_opts_selector: advanced db_opts|subject: rhodopsin_nucs.fasta adv_opts|parse_deflines: False adv_opts|filter_query: False adv_opts|max_hits: 0 db_opts|database: query: four_human_proteins.fasta adv_opts|word_size: output|out_format: 0 -html adv_opts|matrix_gapcosts|matrix: BLOSUM80 |
attributes: name |
four_human_proteins.fasta rhodopsin_nucs.fasta name |